Wraps the four install stages into named functions, one per lib/plagiarism_*.sh
sibling (matching install_exercism.sh's convention), and extracts the two
embedded Python heredocs into real, lint-clean check_plagiarism.py/sherlock.py
files -- check_plagiarism.py needed a second split into plagiarism_similarity.py
to also clear the 250-line cap. Every function reaches 100% shell coverage via
a PATH-shim test harness (fake python3/pip/git/java/wine); the two Python CLIs
were separately verified against a real venv with actual nltk/scikit-learn.
Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_011w2Pj4Ek3ZNMQVYcFHgXDY
CLAUDE.md's longest and most emphatic code rule -- never embed Python program
logic in a shell script -- was enforced by nothing. A repo-wide scan found it
had already been violated: install_plagiarism_tools.sh ran a 6-line NLTK
download as an inline `python3 -c`, invisible to ruff, mypy, pylint, bandit
and pytest, exactly the failure mode the rule exists to prevent.
check_no_inline_python.sh flags heredocs and multi-line `python -c` while
permitting the single-line availability probes the rule explicitly allows, so
the ~250 shell files here produce zero false positives. Commented-out examples
are skipped; otherwise the rule's own documentation would fail the hook.
The extracted download_nltk_data.py also fixes a real defect: the inline block
ignored nltk.download()'s return value, so a partial corpus download reported
success. It now returns non-zero and the caller's `set -e` sees it.
nltk is imported via importlib inside main(), not at module scope: it belongs
to the plagiarism toolchain, not this repo, so it is absent from
requirements.txt and unresolvable to pylint as a static import.
No suppressions anywhere: T201 avoided with sys.stderr.write, INP001 with a
shebang (matching sibling fast_count.py), E0401 with the dynamic import.
pylint 10.00/10, ruff clean, mypy clean.
Verified the gate fires rather than passing vacuously -- a staged canary with
a real heredoc exits non-zero -- and that the extracted script runs.
Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_011w2Pj4Ek3ZNMQVYcFHgXDY
The shellcheck hook ran with --severity=warning, so info- and style-level
findings never failed a commit. 222 had accumulated across 94 of 244 shell
files. They were not all style noise -- six were bugs:
- Five scripts in single_use/misc/testsAndMisc-bash/ sourced
$SCRIPT_DIR/../../lib/common.sh, one directory too shallow. Nothing exists
at that path, so all five failed at runtime.
- setup_personal_website.sh and setup_kcd2_dice_solver.sh called usage()
(which ends in `exit 0`) and then `exit 1` for an unknown command. The
exit 1 was unreachable, so a typo'd subcommand reported SUCCESS.
- Six i3blocks scripts had a `# shellcheck source=` directive missing the
scripts/periodic_background/ path segment. The stale path had silently
disabled source-following for all of them.
- diagnose_arch_performance.sh word-split a newline-joined file list; when
the find came back empty, awk got no file operands, fell through to
reading stdin, and the diagnostic hung.
- lib/common.sh's handle_arg_help_or_unknown ended in an unreachable
`return 0` while documenting "Returns: 0 if handled" -- a contract no code
path could satisfy.
- deploy.sh's SCRIPT_DIR is reassigned by config.sh, which it sources at top
level, and config.sh can repoint it at the on-device path
/data/local/tmp/focus_mode. Renamed to DEPLOY_DIR.
The SC1091 bulk (81 findings) was resolved rather than silenced: .shellcheckrc
sets external-sources + source-path=SCRIPTDIR so sourced files are actually
followed and analysed. That is what surfaced the i3blocks and deploy.sh bugs.
17 `# shellcheck disable=` directives remain, each with a written reason, and
only where the finding is provably wrong: injection-test payloads that must not
expand, literal source text being grepped for, POSIX sh scripts on the phone
where arrays do not exist, and source paths that only exist at runtime.
Everything else was fixed in code.
Verified in a CLEAN worktree, not just my own tree. config.sh sources the
gitignored config_secrets.sh, which exists locally but not in a fresh checkout;
a working-tree-only check passed while ci_mirror.sh -- which lints HEAD in a
clean worktree, exactly as CI does -- failed on it.
The gate is verified to bite: a file whose only finding is SC2016 (info) fails
the hook, while the old --severity=warning gate exits 0 on it.
third_party/ is excluded -- vendored upstream, matching the prettier hook.
Not fixed, reported: check_polling_antipatterns.sh carries a pre-existing
SC2034 disable that hides a real bug -- its `patterns` array is never used, so
the checker detects nothing. Confirmed unchanged by this commit.
Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
setup_hosts_guard.sh died partway on every run under `set -euo pipefail`,
which is why hosts-guard.path / hosts-bind-mount.service / nsswitch-guard.path
sat installed-but-disabled since 2026-02-02 and resolved-guard.path was never
installed at all — /etc/hosts had no watcher to restore it if tampered.
Two aborts, both silent:
1. `local_dot=$(grep -E '^\s*DNSOverTLS\s*=' ... | tail -1 | sed ...)` — grep
exits 1 when the key is absent, pipefail propagates, the assignment returns
1, set -e kills the script. DNSOverTLS is absent from a default
resolved.conf, so this fired on EVERY run, right before resolved-guard.path
was enabled. The fix-if-missing branch below it was unreachable because
detecting "missing" aborted first. Same trap on the ReadEtcHosts probe.
check_and_enable_services.sh already guarded its copy with `|| true`.
2. `systemctl restart systemd-resolved` — resolved is MASKED here (dnsmasq
serves DNS), so the restart failed and aborted the script on its last step,
after everything was already configured. Now skipped with a note.
Before: exit 1, resolved-guard disabled, nsswitch-guard start-limit-hit.
After: exit 0; hosts-guard.path, hosts-bind-mount.service, nsswitch-guard.path
and resolved-guard.path all enabled+active. DNS still resolves; getent ahosts
on doubleclick/googlesyndication/facebook returns 0.0.0.0; /etc/hosts still
immutable at 176888 lines.
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01JsCs1GUyiinA7bg68YvAh1
- Move all linux_configuration scripts into two semantic categories:
- single_use/: scripts run once manually (fresh install, fixes, setup)
- periodic_background/: scripts run by systemd timers or daemons
- Preserve existing subdirectory structure within each category
- Fix lib/common.sh source paths for new directory depths
- Fix CONFIG_DIR depth in setup_periodic_system.sh and check_and_enable_services.sh
- Update all references in tests, fresh-install/main.sh, nix modules, and docs
- Fix check_polling_antipatterns.sh false positives (||, regex |, case patterns, jq strings)
- Fix pre-existing mypy exclusion path and type annotations for moved tools/ directory
- Rewrite check_polling_antipatterns.sh using awk (no bash regex loops); add require_serial: true
- Move all linux_configuration scripts into two semantic categories:
- single_use/: scripts run once manually (fresh install, fixes, setup)
- periodic_background/: scripts run by systemd timers or daemons
- Preserve existing subdirectory structure within each category
- Fix lib/common.sh source paths for new directory depths
- Fix CONFIG_DIR depth in setup_periodic_system.sh and check_and_enable_services.sh
- Update all references in tests, fresh-install/main.sh, nix modules, and docs
- Fix check_polling_antipatterns.sh false positives (||, regex |, case patterns, jq strings)
- Fix pre-existing mypy exclusion path and type annotations for moved tools/ directory
- Rewrite check_polling_antipatterns.sh using awk (no bash regex loops); add require_serial: true
